CellGPU
0.8.0
GPU-accelerated simulations of cells
EnergyMinimizerFIRE Member List
This is the complete list of members for
EnergyMinimizerFIRE
, including all inherited members.
alpha
EnergyMinimizerFIRE
protected
alphaDec
EnergyMinimizerFIRE
protected
alphaStart
EnergyMinimizerFIRE
protected
deltaT
EnergyMinimizerFIRE
protected
deltaTDec
EnergyMinimizerFIRE
protected
deltaTInc
EnergyMinimizerFIRE
protected
deltaTMax
EnergyMinimizerFIRE
protected
deltaTMin
EnergyMinimizerFIRE
protected
displacement
EnergyMinimizerFIRE
protected
displacements
simpleEquationOfMotion
protected
EnergyMinimizerFIRE
()
EnergyMinimizerFIRE
inline
EnergyMinimizerFIRE
(shared_ptr< Simple2DModel > system)
EnergyMinimizerFIRE
fireStep
()
EnergyMinimizerFIRE
fireStepCPU
()
EnergyMinimizerFIRE
fireStepGPU
()
EnergyMinimizerFIRE
force
EnergyMinimizerFIRE
protected
forceCutoff
EnergyMinimizerFIRE
protected
forceDotForce
EnergyMinimizerFIRE
protected
forceDotVelocity
EnergyMinimizerFIRE
protected
forceMax
EnergyMinimizerFIRE
protected
getMaxForce
()
EnergyMinimizerFIRE
inline
getNdof
()
updater
inline
getTime
()
simpleEquationOfMotion
inline
getTimestep
()
simpleEquationOfMotion
inline
GPUcompute
updater
protected
initializeFromModel
()
EnergyMinimizerFIRE
initializeParameters
()
EnergyMinimizerFIRE
integrateEquationsOfMotion
()
EnergyMinimizerFIRE
inline
virtual
iterations
EnergyMinimizerFIRE
protected
maxIterations
EnergyMinimizerFIRE
protected
minimize
()
EnergyMinimizerFIRE
model
updater
N
EnergyMinimizerFIRE
protected
Ndof
updater
protected
NMin
EnergyMinimizerFIRE
protected
noise
updaterWithNoise
protected
NSinceNegativePower
EnergyMinimizerFIRE
protected
parallelReduce
(GPUArray< Dscalar > &vec)
EnergyMinimizerFIRE
performUpdate
()
simpleEquationOfMotion
inline
virtual
Period
updater
protected
Phase
updater
protected
Power
EnergyMinimizerFIRE
protected
reIndexArray
(GPUArray< int > &array)
updater
inline
protected
reIndexArray
(GPUArray< Dscalar > &array)
updater
inline
protected
reIndexArray
(GPUArray< Dscalar2 > &array)
updater
inline
protected
reIndexing
updater
protected
reIndexRNG
(GPUArray< curandState > &array)
updaterWithNoise
inline
set2DModel
(shared_ptr< Simple2DModel > _model)
EnergyMinimizerFIRE
inline
virtual
setAlphaDec
(Dscalar ad)
EnergyMinimizerFIRE
inline
setAlphaStart
(Dscalar as)
EnergyMinimizerFIRE
inline
setCPU
()
updater
inline
virtual
setDeltaT
(Dscalar dt)
EnergyMinimizerFIRE
inline
virtual
setDeltaTDec
(Dscalar dtc)
EnergyMinimizerFIRE
inline
setDeltaTInc
(Dscalar dti)
EnergyMinimizerFIRE
inline
setDeltaTMax
(Dscalar tmax)
EnergyMinimizerFIRE
inline
setForceCutoff
(Dscalar fc)
EnergyMinimizerFIRE
inline
setGPU
()
updater
inline
virtual
setMaximumIterations
(int maxIt)
EnergyMinimizerFIRE
inline
setNdof
(int _n)
updater
inline
setNMin
(int nm)
EnergyMinimizerFIRE
inline
setPeriod
(int _p)
updater
inline
setPhase
(int _p)
updater
inline
setReproducible
(bool rep)
updaterWithNoise
inline
virtual
simpleEquationOfMotion
()
simpleEquationOfMotion
inline
spatialSorting
()
updater
inline
virtual
State
EnergyMinimizerFIRE
sumReductionIntermediate
EnergyMinimizerFIRE
protected
sumReductions
EnergyMinimizerFIRE
protected
Timestep
simpleEquationOfMotion
protected
Update
(int timestep)
updater
inline
virtual
updater
()
updater
inline
updater
(int _p) (defined in
updater
)
updater
inline
updaterWithNoise
()
updaterWithNoise
inline
updaterWithNoise
(bool rep)
updaterWithNoise
inline
velocity
EnergyMinimizerFIRE
protected
velocityDotVelocity
EnergyMinimizerFIRE
protected
velocityVerlet
()
EnergyMinimizerFIRE
velocityVerletCPU
()
EnergyMinimizerFIRE
velocityVerletGPU
()
EnergyMinimizerFIRE
Generated on Tue Sep 17 2019 09:19:15 for CellGPU by
1.8.13