CellGPU  0.8.0
GPU-accelerated simulations of cells
EnergyMinimizerFIRE Member List

This is the complete list of members for EnergyMinimizerFIRE, including all inherited members.

alphaEnergyMinimizerFIREprotected
alphaDecEnergyMinimizerFIREprotected
alphaStartEnergyMinimizerFIREprotected
deltaTEnergyMinimizerFIREprotected
deltaTDecEnergyMinimizerFIREprotected
deltaTIncEnergyMinimizerFIREprotected
deltaTMaxEnergyMinimizerFIREprotected
deltaTMinEnergyMinimizerFIREprotected
displacementEnergyMinimizerFIREprotected
displacementssimpleEquationOfMotionprotected
EnergyMinimizerFIRE()EnergyMinimizerFIREinline
EnergyMinimizerFIRE(shared_ptr< Simple2DModel > system)EnergyMinimizerFIRE
fireStep()EnergyMinimizerFIRE
fireStepCPU()EnergyMinimizerFIRE
fireStepGPU()EnergyMinimizerFIRE
forceEnergyMinimizerFIREprotected
forceCutoffEnergyMinimizerFIREprotected
forceDotForceEnergyMinimizerFIREprotected
forceDotVelocityEnergyMinimizerFIREprotected
forceMaxEnergyMinimizerFIREprotected
getMaxForce()EnergyMinimizerFIREinline
getNdof()updaterinline
getTime()simpleEquationOfMotioninline
getTimestep()simpleEquationOfMotioninline
GPUcomputeupdaterprotected
initializeFromModel()EnergyMinimizerFIRE
initializeParameters()EnergyMinimizerFIRE
integrateEquationsOfMotion()EnergyMinimizerFIREinlinevirtual
iterationsEnergyMinimizerFIREprotected
maxIterationsEnergyMinimizerFIREprotected
minimize()EnergyMinimizerFIRE
modelupdater
NEnergyMinimizerFIREprotected
Ndofupdaterprotected
NMinEnergyMinimizerFIREprotected
noiseupdaterWithNoiseprotected
NSinceNegativePowerEnergyMinimizerFIREprotected
parallelReduce(GPUArray< Dscalar > &vec)EnergyMinimizerFIRE
performUpdate()simpleEquationOfMotioninlinevirtual
Periodupdaterprotected
Phaseupdaterprotected
PowerEnergyMinimizerFIREprotected
reIndexArray(GPUArray< int > &array)updaterinlineprotected
reIndexArray(GPUArray< Dscalar > &array)updaterinlineprotected
reIndexArray(GPUArray< Dscalar2 > &array)updaterinlineprotected
reIndexingupdaterprotected
reIndexRNG(GPUArray< curandState > &array)updaterWithNoiseinline
set2DModel(shared_ptr< Simple2DModel > _model)EnergyMinimizerFIREinlinevirtual
setAlphaDec(Dscalar ad)EnergyMinimizerFIREinline
setAlphaStart(Dscalar as)EnergyMinimizerFIREinline
setCPU()updaterinlinevirtual
setDeltaT(Dscalar dt)EnergyMinimizerFIREinlinevirtual
setDeltaTDec(Dscalar dtc)EnergyMinimizerFIREinline
setDeltaTInc(Dscalar dti)EnergyMinimizerFIREinline
setDeltaTMax(Dscalar tmax)EnergyMinimizerFIREinline
setForceCutoff(Dscalar fc)EnergyMinimizerFIREinline
setGPU()updaterinlinevirtual
setMaximumIterations(int maxIt)EnergyMinimizerFIREinline
setNdof(int _n)updaterinline
setNMin(int nm)EnergyMinimizerFIREinline
setPeriod(int _p)updaterinline
setPhase(int _p)updaterinline
setReproducible(bool rep)updaterWithNoiseinlinevirtual
simpleEquationOfMotion()simpleEquationOfMotioninline
spatialSorting()updaterinlinevirtual
StateEnergyMinimizerFIRE
sumReductionIntermediateEnergyMinimizerFIREprotected
sumReductionsEnergyMinimizerFIREprotected
TimestepsimpleEquationOfMotionprotected
Update(int timestep)updaterinlinevirtual
updater()updaterinline
updater(int _p) (defined in updater)updaterinline
updaterWithNoise()updaterWithNoiseinline
updaterWithNoise(bool rep)updaterWithNoiseinline
velocityEnergyMinimizerFIREprotected
velocityDotVelocityEnergyMinimizerFIREprotected
velocityVerlet()EnergyMinimizerFIRE
velocityVerletCPU()EnergyMinimizerFIRE
velocityVerletGPU()EnergyMinimizerFIRE