AreaPeri | Simple2DCell | protected |
AreaPeriPreferences | Simple2DCell | protected |
Box | Simple2DCell | |
cellDeath(int cellIndex) | Simple2DCell | virtual |
cellDivision(const vector< int > ¶meters, const vector< Dscalar > &dParams={}) | Simple2DCell | virtual |
cellForces | Simple2DCell | |
cellMasses | Simple2DCell | |
cellNeighborNum | Simple2DCell | |
cellNeighbors | Simple2DCell | |
cellPositions | Simple2DCell | |
cellType | Simple2DCell | |
cellTypeIndexer | Simple2DCell | |
cellVelocities | Simple2DCell | |
cellVertexNum | Simple2DCell | |
cellVertices | Simple2DCell | protected |
computeEnergy() | Simple2DCell | inlinevirtual |
computeForces() | Simple2DCell | inlinevirtual |
computeGeometry() | Simple2DCell | virtual |
computeGeometryCPU() | Simple2DCell | inlinevirtual |
computeGeometryGPU() | Simple2DCell | inlinevirtual |
computeKineticEnergy() | Simple2DCell | |
computeKineticPressure() | Simple2DCell | |
currentTime | Simple2DModel | |
deltaT | Simple2DCell | |
displacements | Simple2DCell | protected |
Energy | Simple2DCell | |
enforceTopology() | Simple2DCell | inlinevirtual |
forcesUpToDate | Simple2DCell | |
getCellNeighs(int idx, int &nNeighs, vector< int > &neighs) (defined in Simple2DCell) | Simple2DCell | inline |
getDynMatEntries(vector< int2 > &rcs, vector< Dscalar > &vals, Dscalar unstress=1.0, Dscalar stress=1.0) | Simple2DModel | inlinevirtual |
getForces(GPUArray< Dscalar2 > &forces) | Simple2DCell | inlinevirtual |
getMaxForce() | Simple2DCell | inlinevirtual |
getNumberOfDegreesOfFreedom() | Simple2DCell | inlinevirtual |
GPUcompute | Simple2DCell | protected |
idxToTag | Simple2DCell | protected |
idxToTagVertex | Simple2DCell | protected |
initializeCellSorting() | Simple2DCell | protected |
initializeSimple2DCell(int n) | Simple2DCell | |
initializeVertexSorting() | Simple2DCell | protected |
itt | Simple2DCell | protected |
ittVertex | Simple2DCell | protected |
KA | Simple2DCell | protected |
KineticEnergy | Simple2DCell | |
KP | Simple2DCell | protected |
Moduli | Simple2DCell | protected |
moveDegreesOfFreedom(GPUArray< Dscalar2 > &displacements, Dscalar scale=1.) | Simple2DCell | inlinevirtual |
n_idx | Simple2DCell | |
Ncells | Simple2DCell | |
noise | Simple2DCell | protected |
Nvertices | Simple2DCell | |
reIndexCellArray(GPUArray< int > &array) | Simple2DCell | protected |
reIndexCellArray(GPUArray< Dscalar > &array) | Simple2DCell | protected |
reIndexCellArray(GPUArray< Dscalar2 > &array) | Simple2DCell | protected |
reIndexVertexArray(GPUArray< int > &array) | Simple2DCell | protected |
reIndexVertexArray(GPUArray< Dscalar > &array) | Simple2DCell | protected |
reIndexVertexArray(GPUArray< Dscalar2 > &array) | Simple2DCell | protected |
reportAP(bool verbose=false) | Simple2DCell | inline |
reportMeanCellForce(bool verbose) | Simple2DCell | virtual |
reportMeanP() | Simple2DCell | |
reportMeanVertexForce(bool verbose=false) | Simple2DCell | inline |
reportq() | Simple2DCell | virtual |
reportVarAP() | Simple2DCell | |
reportVarq() | Simple2DCell | |
Reproducible | Simple2DCell | protected |
returnAreaPeri() | Simple2DCell | inlinevirtual |
returnAreaPeriPreferences() | Simple2DCell | inlinevirtual |
returnBox() | Simple2DCell | inlinevirtual |
returnForces() | Simple2DCell | inlinevirtual |
returnItt() | Simple2DCell | inlinevirtual |
returnMasses() | Simple2DCell | inlinevirtual |
returnModuli() | Simple2DCell | inlinevirtual |
returnOtherData() | Simple2DCell | inlinevirtual |
returnPositions() | Simple2DCell | inlinevirtual |
returnVelocities() | Simple2DCell | inlinevirtual |
setBox(BoxPtr _box) | Simple2DCell | inline |
setCellPositions(vector< Dscalar2 > newCellPositions) | Simple2DCell | |
setCellPositionsRandomly() | Simple2DCell | |
setCellPreferences(vector< Dscalar2 > &AreaPeriPreferences) | Simple2DCell | |
setCellPreferencesUniform(Dscalar A0, Dscalar P0) | Simple2DCell | |
setCellType(vector< int > &types) | Simple2DCell | |
setCellTypeUniform(int i) | Simple2DCell | |
setCellVelocitiesMaxwellBoltzmann(Dscalar T) | Simple2DCell | |
setCPU() | Simple2DCell | inlinevirtual |
setCPU(bool a)=0 (defined in Simple2DCell) | Simple2DCell | pure virtual |
setDeltaT(Dscalar dt) | Simple2DCell | inline |
setGPU() | Simple2DCell | inlinevirtual |
setModuliUniform(Dscalar newKA, Dscalar newKP) | Simple2DCell | |
setTime(Dscalar time) | Simple2DModel | inlinevirtual |
setv0Dr(Dscalar a, Dscalar b)=0 (defined in Simple2DCell) | Simple2DCell | pure virtual |
setVertexPositions(vector< Dscalar2 > newVertexPositions) | Simple2DCell | |
setVertexTopologyFromCells(vector< vector< int > > cellVertexIndices) | Simple2DCell | |
setVertexVelocitiesMaxwellBoltzmann(Dscalar T) | Simple2DCell | |
Simple2DCell() | Simple2DCell | |
spatiallySortCells() | Simple2DCell | protected |
spatiallySortVertices() | Simple2DCell | protected |
spatialSorting() | Simple2DModel | inlinevirtual |
tagToIdx | Simple2DCell | |
tagToIdxVertex | Simple2DCell | |
Timestep | Simple2DCell | |
tti | Simple2DCell | protected |
ttiVertex | Simple2DCell | protected |
vertexCellNeighbors | Simple2DCell | |
vertexForces | Simple2DCell | |
vertexMasses | Simple2DCell | |
vertexMax | Simple2DCell | protected |
vertexNeighbors | Simple2DCell | |
vertexPositions | Simple2DCell | |
vertexVelocities | Simple2DCell | |
voroCur | Simple2DCell | protected |
voroLastNext | Simple2DCell | protected |