CellGPU  0.8.0
GPU-accelerated simulations of cells
Simple2DCell Member List

This is the complete list of members for Simple2DCell, including all inherited members.

AreaPeriSimple2DCellprotected
AreaPeriPreferencesSimple2DCellprotected
BoxSimple2DCell
cellDeath(int cellIndex)Simple2DCellvirtual
cellDivision(const vector< int > &parameters, const vector< Dscalar > &dParams={})Simple2DCellvirtual
cellForcesSimple2DCell
cellMassesSimple2DCell
cellNeighborNumSimple2DCell
cellNeighborsSimple2DCell
cellPositionsSimple2DCell
cellTypeSimple2DCell
cellTypeIndexerSimple2DCell
cellVelocitiesSimple2DCell
cellVertexNumSimple2DCell
cellVerticesSimple2DCellprotected
computeEnergy()Simple2DCellinlinevirtual
computeForces()Simple2DCellinlinevirtual
computeGeometry()Simple2DCellvirtual
computeGeometryCPU()Simple2DCellinlinevirtual
computeGeometryGPU()Simple2DCellinlinevirtual
computeKineticEnergy()Simple2DCell
computeKineticPressure()Simple2DCell
currentTimeSimple2DModel
deltaTSimple2DCell
displacementsSimple2DCellprotected
EnergySimple2DCell
enforceTopology()Simple2DCellinlinevirtual
forcesUpToDateSimple2DCell
getCellNeighs(int idx, int &nNeighs, vector< int > &neighs) (defined in Simple2DCell)Simple2DCellinline
getDynMatEntries(vector< int2 > &rcs, vector< Dscalar > &vals, Dscalar unstress=1.0, Dscalar stress=1.0)Simple2DModelinlinevirtual
getForces(GPUArray< Dscalar2 > &forces)Simple2DCellinlinevirtual
getMaxForce()Simple2DCellinlinevirtual
getNumberOfDegreesOfFreedom()Simple2DCellinlinevirtual
GPUcomputeSimple2DCellprotected
idxToTagSimple2DCellprotected
idxToTagVertexSimple2DCellprotected
initializeCellSorting()Simple2DCellprotected
initializeSimple2DCell(int n)Simple2DCell
initializeVertexSorting()Simple2DCellprotected
ittSimple2DCellprotected
ittVertexSimple2DCellprotected
KASimple2DCellprotected
KineticEnergySimple2DCell
KPSimple2DCellprotected
ModuliSimple2DCellprotected
moveDegreesOfFreedom(GPUArray< Dscalar2 > &displacements, Dscalar scale=1.)Simple2DCellinlinevirtual
n_idxSimple2DCell
NcellsSimple2DCell
noiseSimple2DCellprotected
NverticesSimple2DCell
reIndexCellArray(GPUArray< int > &array)Simple2DCellprotected
reIndexCellArray(GPUArray< Dscalar > &array)Simple2DCellprotected
reIndexCellArray(GPUArray< Dscalar2 > &array)Simple2DCellprotected
reIndexVertexArray(GPUArray< int > &array)Simple2DCellprotected
reIndexVertexArray(GPUArray< Dscalar > &array)Simple2DCellprotected
reIndexVertexArray(GPUArray< Dscalar2 > &array)Simple2DCellprotected
reportAP(bool verbose=false)Simple2DCellinline
reportMeanCellForce(bool verbose)Simple2DCellvirtual
reportMeanP()Simple2DCell
reportMeanVertexForce(bool verbose=false)Simple2DCellinline
reportq()Simple2DCellvirtual
reportVarAP()Simple2DCell
reportVarq()Simple2DCell
ReproducibleSimple2DCellprotected
returnAreaPeri()Simple2DCellinlinevirtual
returnAreaPeriPreferences()Simple2DCellinlinevirtual
returnBox()Simple2DCellinlinevirtual
returnForces()Simple2DCellinlinevirtual
returnItt()Simple2DCellinlinevirtual
returnMasses()Simple2DCellinlinevirtual
returnModuli()Simple2DCellinlinevirtual
returnOtherData()Simple2DCellinlinevirtual
returnPositions()Simple2DCellinlinevirtual
returnVelocities()Simple2DCellinlinevirtual
setBox(BoxPtr _box)Simple2DCellinline
setCellPositions(vector< Dscalar2 > newCellPositions)Simple2DCell
setCellPositionsRandomly()Simple2DCell
setCellPreferences(vector< Dscalar2 > &AreaPeriPreferences)Simple2DCell
setCellPreferencesUniform(Dscalar A0, Dscalar P0)Simple2DCell
setCellType(vector< int > &types)Simple2DCell
setCellTypeUniform(int i)Simple2DCell
setCellVelocitiesMaxwellBoltzmann(Dscalar T)Simple2DCell
setCPU()Simple2DCellinlinevirtual
setCPU(bool a)=0 (defined in Simple2DCell)Simple2DCellpure virtual
setDeltaT(Dscalar dt)Simple2DCellinline
setGPU()Simple2DCellinlinevirtual
setModuliUniform(Dscalar newKA, Dscalar newKP)Simple2DCell
setTime(Dscalar time)Simple2DModelinlinevirtual
setv0Dr(Dscalar a, Dscalar b)=0 (defined in Simple2DCell)Simple2DCellpure virtual
setVertexPositions(vector< Dscalar2 > newVertexPositions)Simple2DCell
setVertexTopologyFromCells(vector< vector< int > > cellVertexIndices)Simple2DCell
setVertexVelocitiesMaxwellBoltzmann(Dscalar T)Simple2DCell
Simple2DCell()Simple2DCell
spatiallySortCells()Simple2DCellprotected
spatiallySortVertices()Simple2DCellprotected
spatialSorting()Simple2DModelinlinevirtual
tagToIdxSimple2DCell
tagToIdxVertexSimple2DCell
TimestepSimple2DCell
ttiSimple2DCellprotected
ttiVertexSimple2DCellprotected
vertexCellNeighborsSimple2DCell
vertexForcesSimple2DCell
vertexMassesSimple2DCell
vertexMaxSimple2DCellprotected
vertexNeighborsSimple2DCell
vertexPositionsSimple2DCell
vertexVelocitiesSimple2DCell
voroCurSimple2DCellprotected
voroLastNextSimple2DCellprotected